CDS

Accession Number TCMCG007C03055
gbkey CDS
Protein Id XP_009121648.1
Location complement(join(16755701..16756084,16756188..16756378,16756546..16756753,16756841..16756885,16756984..16757163,16757249..16757380,16757478..16757657))
Gene LOC103846471
GeneID 103846471
Organism Brassica rapa

Protein

Length 439aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_009123400.3
Definition polygalacturonase At1g48100 isoform X1 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category G
Description Polygalacturonase
KEGG_TC -
KEGG_Module M00081        [VIEW IN KEGG]
KEGG_Reaction R01982        [VIEW IN KEGG]
R02360        [VIEW IN KEGG]
R07413        [VIEW IN KEGG]
KEGG_rclass RC00049        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K01184        [VIEW IN KEGG]
ko:K01213        [VIEW IN KEGG]
EC 3.2.1.15        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
3.2.1.67        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00040        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
map00040        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004553        [VIEW IN EMBL-EBI]
GO:0004650        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005618        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009664        [VIEW IN EMBL-EBI]
GO:0009825        [VIEW IN EMBL-EBI]
GO:0009827        [VIEW IN EMBL-EBI]
GO:0009831        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016049        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016798        [VIEW IN EMBL-EBI]
GO:0030312        [VIEW IN EMBL-EBI]
GO:0040007        [VIEW IN EMBL-EBI]
GO:0042545        [VIEW IN EMBL-EBI]
GO:0042547        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045229        [VIEW IN EMBL-EBI]
GO:0071554        [VIEW IN EMBL-EBI]
GO:0071555        [VIEW IN EMBL-EBI]
GO:0071669        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0071944        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTATAGTCTAACCTTGAAATGTCTTGCCCTGAAACTTCTCCTTTTAATCTCTTGTGACGCTAGACACAGTGTATACTGGAGAGGAAACCGCAGGTCTAACGCTGAAGGGGGAAGTTCCGGAACGTTCAATGTCCTTGACTATGGTGCAAAAGGTGACGGGACAAGTGATGACACGAAGGCCTTTGAAGATGCTTGGAATGAAGCTTGTAAAGTGGCAGCATCGACATTATTAGTTCCATCCGGTTCTACGTTCCTTGTTGGACCTGTCTCCTTCCTGGGAAAAGAGTGTAAAGAGAACATTGTATTTCAGTTAGATGGAAAGATCATAGCTCCAACAAGTTCGAGTGTCTGGGGATCAGGTCTCTTGCAATGGATGGAATTCAAATCACTTACAGGAATCACTATAAAAGGAAAAGGAGTAATAGATGGACAAGGATCGGTATGGTGGAACAAGTCCCCTGACTATGATCCAGCAGATGAGAACGACATGATGAAGGATCGAAAGGGCACGAAAATGCCAGGAACAAAACCAACAGCGTTGAGATTCTACGGGAGTAACGGTGTAATGGTTAATGGAATAACCATACAGAACAGCCCTCAGACCCACCTCAAGTTTGATAACTGCGTAAACATTCAAGTGTCTGACTTCACAACTTCATCTCCTGGAGATTCTCCAAACACAGATGGAATCCACCTGCAAAACTCTCAAGACGCCGTTATTTACCGCAGCACGCTGGCTTGTGGAGATGACTGTATATCAATTCAAACAGGATGCTCAAATATCTACATACACGATGTAGACTGTGGGCCTGGCCATGGAATTAGCATTGGAGGACTAGGAAAGGAGAACACAAAGGCGTGTGTTTCAAACATCACTGTCCGTGATGTCACTATGCATGAAACTACGAATGGTGTTCGAATAAAATCCTGGCAGGGAGGGTCAGGGTCTGTAAAACAAGTTATGTTTTCAAATATCCAAGTCAGCGAAGTAGCTAATCCGATAGTAATAGATCAATATTACTGCGATGGTGGAGGATGCCACAATGAAACTTCAGCAGTCGCTGTATCAAACATAAACTACATAAACATAAAAGGTACCTACACAAGGGAACCTGTACGCTTTGCATGCAGTGATAGCTTGCCATGCACAGGGATCTCACTGTCGACCATAGAGCTTAAGCCGGCCACAGATAAAGCAAGTTCAAGTGAGCCTTTCTGTTGGGAAGCACACGGTGAATTGAAAACTGAAACTCTTCCTCCAATTCAGTGTTTGAAAACAGAAAAGTCTACAAGTCAGTCTTCCAATGATGCTTGCTGA
Protein:  
MYSLTLKCLALKLLLLISCDARHSVYWRGNRRSNAEGGSSGTFNVLDYGAKGDGTSDDTKAFEDAWNEACKVAASTLLVPSGSTFLVGPVSFLGKECKENIVFQLDGKIIAPTSSSVWGSGLLQWMEFKSLTGITIKGKGVIDGQGSVWWNKSPDYDPADENDMMKDRKGTKMPGTKPTALRFYGSNGVMVNGITIQNSPQTHLKFDNCVNIQVSDFTTSSPGDSPNTDGIHLQNSQDAVIYRSTLACGDDCISIQTGCSNIYIHDVDCGPGHGISIGGLGKENTKACVSNITVRDVTMHETTNGVRIKSWQGGSGSVKQVMFSNIQVSEVANPIVIDQYYCDGGGCHNETSAVAVSNINYINIKGTYTREPVRFACSDSLPCTGISLSTIELKPATDKASSSEPFCWEAHGELKTETLPPIQCLKTEKSTSQSSNDAC